Sudan is a vast country marked by heterogeneity, dissimilarities, and diversities in its climates, topography, natural features, cultures, and people. Sudan’s multiplicity of cultures and communities is steeped in history and heritage as remarkable as anywhere else in the ancient world and the rest of Africa. Despite this, Africa’s heritage has been overlooked for centuries as a result of prejudice and stereotyping. The 19th and 20th centuries were characterized by supposition and fixation on an external origin of African civilizations, a focus that was based on European ethnocentrism and a sense of racial superiority. In common with the rest of Africa, archaeology was founded during the colonial period and, to a large extent, remained unchanged, retaining past management and interpretative approaches and influencing current practices and planning policies. Sudan’s rich and outstanding heritage, the home of the first great civilizations in Sub-Saharan Africa, was frequently overlooked. When discussing the civilizations of the Nile Valley, many historians and archaeologists focus entirely on the role of Egypt. Ancient civilizations in Sudan were constantly interpreted as the work of colonizers and were believed to be less advanced than Egyptian civilizations. The building of the Aswan High Dam threatened the lives of Nubians and their heritage. It necessitated the forced displacement of Nubian and Bushareen nomadic tribes from their homelands and submerged considerable heritage. Nonetheless, this was the first time an organized survey was undertaken in Sudanese Nubia. The rescue campaign provided archaeological evidence and replaced ethnic prehistory with new theories. Archaeology in Sudan underwent a dreadful experience throughout the thirty years it was under the governance of the ousted dictatorial regime. The government in power in 1989–2019, an autocratic rule with a different political ideology, took control over Sudan’s heritage. Along with an oil boom, fast modernization, urbanization, and unrest in the country, all these factors had a tremendous impact on archaeology and heritage and on the operation of the National Corporation for Antiquities and Museums (NCAM). Moreover, the military forces, which used archaeological sites as military bases, took control over and demolished significant heritage and disconnected local communities from their heritage. From the 1980s, the number of native archaeologists and departments of archaeology increased. This period witnessed an expansion in research projects, themes, topics, periods, methods, and regions explored by Sudanese and foreign teams. There is a move away from focusing on single sites to understanding and exploring past environments and landscapes using new scientific methods of investigation. There are multiple challenges ahead, including climate change (flooding, destratification, shifting sands), globalization, mega-developments, lack of sufficient funding and resources, and, most recently, Covid-19. These are complex issues to deal with, especially for poor counties. Development and unrest in Sudan continue to force communities to move from their homelands and threaten the loss of traditional knowledge, diversity of culture, and connectedness with the land.